Torrents Pseudogenes :: 4

--> -->
 
 
<type 'exceptions.IOError'>
Python 2.6.1: /usr/bin/python
Sat Oct 21 12:00:05 2017

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/tables.gersteinlab.org/index.cgi in ()
  197                 print e.__class__.__name__, "</B><BR>"
  198                 print "<I>", e , "</I>"
  199                 print "</td></tr></table>"
  200 else:
  201         main_html(form)
main_html = <function main_html at 0xb7e45064>, form = FieldStorage(None, None, [MiniFieldStorage('table', 'Torrents'), MiniFieldStorage('value', '4')])
 /var/www/html/tables.gersteinlab.org/index.cgi in main_html(form=FieldStorage(None, None, [MiniFieldStorage('table', 'Torrents'), MiniFieldStorage('value', '4')]))
  122         else:
  123                 Display = DataDisplay(app, key, conn)
  124         print Display.display_str()
  125         
  126         print "</FONT></BODY></HTML>"
Display = <DataDisplayer.HumanGenomicDisplay instance at 0xb7e8b8ec>, Display.display_str = <bound method HumanGenomicDisplay.display_str of...ayer.HumanGenomicDisplay instance at 0xb7e8b8ec>>
 /home/www/html/tables.gersteinlab.org/DataDisplayer.py in display_str(self=<DataDisplayer.HumanGenomicDisplay instance at 0xb7e8b8ec>)
  545                 display += self.attributes_box()
  546                 display += self.id_history()
  547                 display += self.overlapping_annotations()
  548                 if 'fragment_browser' in self.app.attributes and self.app.attributes['fragment_browser'] == 'enabled':                  
  549                         import yass
display = '<div class="module" id="table">\n<P><table cellsp...d>pseudogene.org</td>\n</tr>\n</tbody></table></P>\n', self = <DataDisplayer.HumanGenomicDisplay instance at 0xb7e8b8ec>, self.overlapping_annotations = <bound method HumanGenomicDisplay.overlapping_an...ayer.HumanGenomicDisplay instance at 0xb7e8b8ec>>
 /home/www/html/tables.gersteinlab.org/DataDisplayer.py in overlapping_annotations(self=<DataDisplayer.HumanGenomicDisplay instance at 0xb7e8b8ec>)
  424                         image = svg.make_svg()
  425                         file_name = str(time.time()) + ".svg"
  426                         image.save(conf.MEDIA_LOCATION + file_name)
  427                         display += "<TD>"
  428                         display += "<img src=\"%s%s\"></TD>" % (conf.MEDIA_URL, file_name)
image = <svg (1 sub) style='stroke-linejoin:round; strok...' viewBox='20787876 0 1341.000000 1341.000000' />, image.save = <bound method SVG.save of <svg (1 sub) style='st... viewBox='20787876 0 1341.000000 1341.000000' />>, global conf = <module 'conf' from '/home/www/html/tables.gersteinlab.org/conf.pyc'>, conf.MEDIA_LOCATION = '/var/www/html/ted.gersteinlab.org/tables/media/', file_name = '1508601605.39.svg'
 /usr/local/lib/python2.6/site-packages/svgfig.py in save(self=<svg (1 sub) style='stroke-linejoin:round; strok...' viewBox='20787876 0 1341.000000 1341.000000' />, fileName='/var/www/html/ted.gersteinlab.org/tables/media/1508601605.39.svg', encoding='utf-8', compresslevel=None)
  431 
  432     else:
  433       f = codecs.open(fileName, "w", encoding=encoding)
  434       f.write(self.standalone_xml())
  435       f.close()
f undefined, global codecs = <module 'codecs' from '/usr/local/lib/python2.6/codecs.pyc'>, codecs.open = <function open at 0xb7f2c374>, fileName = '/var/www/html/ted.gersteinlab.org/tables/media/1508601605.39.svg', encoding = 'utf-8'
 /usr/local/lib/python2.6/codecs.py in open(filename='/var/www/html/ted.gersteinlab.org/tables/media/1508601605.39.svg', mode='wb', encoding='utf-8', errors='strict', buffering=1)
  863         # Force opening of the file in binary mode
  864         mode = mode + 'b'
  865     file = __builtin__.open(filename, mode, buffering)
  866     if encoding is None:
  867         return file
builtin file = <type 'file'>, global __builtin__ = <module '__builtin__' (built-in)>, __builtin__.open = <built-in function open>, filename = '/var/www/html/ted.gersteinlab.org/tables/media/1508601605.39.svg', mode = 'wb', buffering = 1

<type 'exceptions.IOError'>: [Errno 2] No such file or directory: '/var/www/html/ted.gersteinlab.org/tables/media/1508601605.39.svg'
      args = (2, 'No such file or directory')
      errno = 2
      filename = '/var/www/html/ted.gersteinlab.org/tables/media/1508601605.39.svg'
      message = ''
      strerror = 'No such file or directory'